Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.92□□□□□ -1.3
Lire1P11260 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Olfr471-201ENSMUST00000210091 936 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm7151-201ENSMUST00000211511 954 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC6.92□□□□□ -1.3
Lire1P11260 Gm4800-201ENSMUST00000215776 1266 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Gm19056-201ENSMUST00000218220 797 ntBASIC6.92□□□□□ -1.3
Lire1P11260 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.92□□□□□ -1.3
Lire1P11260 AC163667.2-201ENSMUST00000223769 791 ntBASIC6.92□□□□□ -1.3
Lire1P11260 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.92□□□□□ -1.3
Lire1P11260 AC139209.2-201ENSMUST00000227680 1208 ntBASIC6.92□□□□□ -1.3
Lire1P11260 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.92□□□□□ -1.3
Lire1P11260 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Lire1P11260 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
Lire1P11260 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Lire1P11260 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Lire1P11260 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.92□□□□□ -1.3
Lire1P11260 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Lire1P11260 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Lire1P11260 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Gm22022-201ENSMUST00000104355 127 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
Lire1P11260 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 Gm6884-201ENSMUST00000119318 615 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Gm12967-201ENSMUST00000122147 289 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC6.91□□□□□ -1.3
Lire1P11260 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC6.91□□□□□ -1.3
Lire1P11260 Gm17205-201ENSMUST00000168370 1207 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Gm21430-201ENSMUST00000182998 998 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Mir8099-2-201ENSMUST00000183568 127 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Mir8099-1-201ENSMUST00000184238 127 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC6.91□□□□□ -1.3
Lire1P11260 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Gm42464-201ENSMUST00000196717 417 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Gm42760-201ENSMUST00000199814 311 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Gm7542-201ENSMUST00000201140 777 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Gm44147-201ENSMUST00000204658 94 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Gm5418-201ENSMUST00000206932 528 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC6.91□□□□□ -1.3
Lire1P11260 AC122360.1-201ENSMUST00000217737 624 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Gm46311-201ENSMUST00000217971 203 ntBASIC6.91□□□□□ -1.3
Lire1P11260 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.91□□□□□ -1.3
Lire1P11260 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Lire1P11260 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Lire1P11260 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Lire1P11260 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Lire1P11260 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Lire1P11260 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Lire1P11260 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Lire1P11260 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Lire1P11260 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 Gm43502-201ENSMUST00000200263 2596 ntBASIC6.91□□□□□ -1.3
Lire1P11260 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Lire1P11260 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Lire1P11260 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.9□□□□□ -1.3
Lire1P11260 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
Lire1P11260 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms