Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Chmp6P0C0A3 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.57□□□□□ -1.2
Chmp6P0C0A3 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC7.57□□□□□ -1.2
Chmp6P0C0A3 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Chmp6P0C0A3 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Chmp6P0C0A3 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Chmp6P0C0A3 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC7.57□□□□□ -1.2
Chmp6P0C0A3 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Chmp6P0C0A3 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Chmp6P0C0A3 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm37283-201ENSMUST00000193111 1571 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm23485-201ENSMUST00000104181 155 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm15203-201ENSMUST00000117668 455 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm13900-201ENSMUST00000119402 498 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm15096-201ENSMUST00000121918 878 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm27972-201ENSMUST00000184720 137 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm28941-201ENSMUST00000185536 1017 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm42464-202ENSMUST00000198111 774 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm43212-201ENSMUST00000198208 394 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm44943-201ENSMUST00000207254 300 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm7972-201ENSMUST00000208434 1137 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 AC138604.2-201ENSMUST00000226620 921 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm6166-201ENSMUST00000098689 409 ntBASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Chmp6P0C0A3 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC107452.3-201ENSMUST00000228807 1308 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC129308.1-201ENSMUST00000223800 2309 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm37206-201ENSMUST00000195512 3069 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm22781-201ENSMUST00000104083 137 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm13798-201ENSMUST00000118285 139 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm26480-201ENSMUST00000122619 297 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm25178-201ENSMUST00000122633 325 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm15501-202ENSMUST00000140687 625 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm26183-201ENSMUST00000157685 139 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm17149-201ENSMUST00000164712 375 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm36932-201ENSMUST00000195226 929 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm24826-202ENSMUST00000197298 216 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm18430-201ENSMUST00000197534 682 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm43656-201ENSMUST00000197882 434 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm46311-201ENSMUST00000217971 203 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC154515.3-201ENSMUST00000225081 1159 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC106830.2-201ENSMUST00000226624 943 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 AC133958.1-201ENSMUST00000227085 961 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Snora21-201ENSMUST00000082967 137 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Mir138-2-201ENSMUST00000083578 71 ntBASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Chmp6P0C0A3 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms