Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm36949-201ENSMUST00000192487 2327 ntBASIC6.65□□□□□ -1.35
Hoxd3P09027 Atp6ap2-201ENSMUST00000033313 2324 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.35
Hoxd3P09027 Zfp260-201ENSMUST00000050735 4006 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Zbtb44-206ENSMUST00000217092 2472 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Hoxd3P09027 Pramef12-201ENSMUST00000030326 2460 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Hoxd3P09027 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 AC165260.6-201ENSMUST00000225447 1735 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm16239-201ENSMUST00000160182 2635 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Smcr8-202ENSMUST00000102667 3544 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Tmem69-202ENSMUST00000106478 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Rnmt-201ENSMUST00000009679 5008 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Eps15-202ENSMUST00000102729 5190 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Dynlt3-201ENSMUST00000033519 2176 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm12206-201ENSMUST00000119795 601 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm8778-201ENSMUST00000127246 1107 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm13548-201ENSMUST00000144688 385 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm22841-201ENSMUST00000158443 62 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 A230009B12Rik-201ENSMUST00000159422 898 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm5929-201ENSMUST00000166883 487 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Elf5-207ENSMUST00000171693 965 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm9531-202ENSMUST00000183511 775 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm29281-201ENSMUST00000188077 381 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm20788-201ENSMUST00000190538 697 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm37111-201ENSMUST00000193250 634 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 BC085271-202ENSMUST00000195236 867 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm42429-201ENSMUST00000198579 558 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm44203-201ENSMUST00000203134 307 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC6.64□□□□□ -1.35
Hoxd3P09027 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC6.64□□□□□ -1.35
Hoxd3P09027 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm8264-201ENSMUST00000217801 465 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.64□□□□□ -1.35
Hoxd3P09027 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm18601-201ENSMUST00000220831 634 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm32834-202ENSMUST00000222417 655 ntTSL 3 BASIC6.64□□□□□ -1.35
Hoxd3P09027 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 AC159263.3-201ENSMUST00000223434 460 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.64□□□□□ -1.35
Hoxd3P09027 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 AC164879.1-201ENSMUST00000227904 1021 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Apoh-201ENSMUST00000000049 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm25004-201ENSMUST00000083811 161 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 n-R5s168-201ENSMUST00000083948 104 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Pgr15l-201ENSMUST00000033556 5379 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm44541-201ENSMUST00000207837 2907 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 Tnf-202ENSMUST00000167924 1462 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Acaca-201ENSMUST00000020843 9026 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Slc2a9-210ENSMUST00000155634 3164 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Arhgap17-211ENSMUST00000207010 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Me1-202ENSMUST00000185374 3292 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Prickle2-202ENSMUST00000113445 3708 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Champ1-202ENSMUST00000128557 3977 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Osmr-204ENSMUST00000176826 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Ephx2-203ENSMUST00000225309 2032 ntBASIC6.64□□□□□ -1.35
Hoxd3P09027 2610008E11Rik-201ENSMUST00000039271 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Hoxd3P09027 Duxbl1-203ENSMUST00000172667 2209 ntTSL 5 BASIC6.64□□□□□ -1.35
Hoxd3P09027 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms