Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm5970-201ENSMUST00000131638 1216 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm28527-201ENSMUST00000185210 297 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm29385-201ENSMUST00000186831 363 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm19185-201ENSMUST00000196365 643 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm45782-201ENSMUST00000212670 366 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Olfr809-203ENSMUST00000218237 1100 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 AC154573.2-201ENSMUST00000224174 378 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm15732-201ENSMUST00000079794 480 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Gm44677-201ENSMUST00000209151 3739 ntBASIC12.67□□□□□ -0.38
Ccdc180J3QNE4 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Gm16123-201ENSMUST00000118647 1517 ntBASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Erg-202ENSMUST00000113846 3249 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Gm8844-201ENSMUST00000119460 2614 ntBASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Gm29470-201ENSMUST00000188007 696 ntBASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Gm37135-201ENSMUST00000192652 534 ntBASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc180J3QNE4 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm26422-201ENSMUST00000104276 132 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm24473-201ENSMUST00000104483 131 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 n-R5s16-201ENSMUST00000104555 119 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Sms-ps-201ENSMUST00000121773 1101 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Rps29-ps-201ENSMUST00000122083 172 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm28996-201ENSMUST00000190316 721 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm43089-201ENSMUST00000199162 275 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm9240-201ENSMUST00000206527 742 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm45739-201ENSMUST00000213094 388 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm18040-201ENSMUST00000217922 827 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 AC156790.1-201ENSMUST00000226572 559 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm44898-201ENSMUST00000205934 2223 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Snhg17-209ENSMUST00000186993 3144 ntBASIC12.65□□□□□ -0.38
Ccdc180J3QNE4 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ccdc180J3QNE4 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ccdc180J3QNE4 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Gm43411-201ENSMUST00000196235 1579 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Gm25342-201ENSMUST00000157459 122 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Gm26410-201ENSMUST00000157670 261 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Gm20615-201ENSMUST00000177503 705 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 AC131187.2-201ENSMUST00000223936 994 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 AC156559.2-201ENSMUST00000224403 384 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Cma2-202ENSMUST00000228263 857 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 AC135119.1-202ENSMUST00000228435 2203 ntBASIC12.64□□□□□ -0.39
Ccdc180J3QNE4 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms