Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Syngap1F6SEU4 Gm43537-201ENSMUST00000199064 3110 ntBASIC8.07□□□□□ -1.12
Syngap1F6SEU4 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Syngap1F6SEU4 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Syngap1F6SEU4 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Syngap1F6SEU4 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Syngap1F6SEU4 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Syngap1F6SEU4 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.07□□□□□ -1.12
Syngap1F6SEU4 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Syngap1F6SEU4 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm18726-201ENSMUST00000218175 2010 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm26340-201ENSMUST00000102365 99 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm16221-201ENSMUST00000117331 393 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm14990-201ENSMUST00000122354 445 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm25246-201ENSMUST00000175476 69 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm18006-201ENSMUST00000177411 662 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm27998-201ENSMUST00000184902 361 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm42437-201ENSMUST00000197263 923 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 AC165349.1-201ENSMUST00000217896 424 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm4803-201ENSMUST00000218729 1279 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 CT033778.1-201ENSMUST00000224767 767 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 AC122533.1-201ENSMUST00000225177 767 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 AC170810.1-201ENSMUST00000228267 672 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 CT009600.1-201ENSMUST00000228771 337 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm26163-201ENSMUST00000083792 178 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Tcf24-201ENSMUST00000097824 2639 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm43612-201ENSMUST00000196087 3207 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 AC121286.2-201ENSMUST00000218069 2470 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm42478-201ENSMUST00000199252 1467 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm26831-201ENSMUST00000181458 1380 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 9530036M11Rik-201ENSMUST00000138767 1996 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Gm6820-201ENSMUST00000188803 2173 ntBASIC8.06□□□□□ -1.12
Syngap1F6SEU4 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm22267-201ENSMUST00000104008 131 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm25379-201ENSMUST00000104338 114 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm9506-201ENSMUST00000118516 320 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm12844-201ENSMUST00000119463 582 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Mir1930-201ENSMUST00000158799 84 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm15257-201ENSMUST00000177680 883 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm15252-201ENSMUST00000177750 883 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm15256-201ENSMUST00000177793 883 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm15260-201ENSMUST00000179402 883 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm43595-201ENSMUST00000196464 1071 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm43235-201ENSMUST00000200121 297 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm8667-201ENSMUST00000211112 449 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 AC112680.2-201ENSMUST00000213119 595 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 AC124184.1-201ENSMUST00000218167 283 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 AC124489.1-201ENSMUST00000225852 526 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Syngap1F6SEU4 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms