Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Scn3aA2ASI5 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.71□□□□□ -1.17
Scn3aA2ASI5 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.71□□□□□ -1.17
Scn3aA2ASI5 Wdfy3-201ENSMUST00000053177 14274 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Scn3aA2ASI5 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm37783-201ENSMUST00000192025 1856 ntBASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm26691-201ENSMUST00000180471 4401 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm12447-201ENSMUST00000119110 470 ntBASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm16249-201ENSMUST00000124055 1258 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm29784-201ENSMUST00000196217 406 ntBASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm7463-201ENSMUST00000201541 547 ntBASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm18620-201ENSMUST00000222295 324 ntBASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.71□□□□□ -1.18
Scn3aA2ASI5 CT571245.1-201ENSMUST00000218642 3465 ntBASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 4931406P16Rik-202ENSMUST00000108074 6224 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC7.71□□□□□ -1.18
Scn3aA2ASI5 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm24473-201ENSMUST00000104483 131 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm14745-201ENSMUST00000118480 1096 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm24781-201ENSMUST00000157636 117 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm23426-201ENSMUST00000122483 318 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm26570-201ENSMUST00000180672 342 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm44374-201ENSMUST00000199821 140 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm44705-201ENSMUST00000206719 339 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm18914-201ENSMUST00000214625 616 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm17849-201ENSMUST00000219788 853 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Olfr930-201ENSMUST00000058789 1101 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Scn3aA2ASI5 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Scn3aA2ASI5 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms