Protein–RNA interactions for Protein: Q9WTN0

Ggps1, Geranylgeranyl pyrophosphate synthase, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ggps1Q9WTN0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Gm10138-203ENSMUST00000206952 366 ntBASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ggps1Q9WTN0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Mir5122-201ENSMUST00000175004 89 ntBASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Gm38285-201ENSMUST00000192928 922 ntBASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.31■□□□□ 0.84
Ggps1Q9WTN0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Gm7977-201ENSMUST00000193787 748 ntBASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ggps1Q9WTN0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ggps1Q9WTN0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Gm15375-201ENSMUST00000119510 849 ntBASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Gm43183-201ENSMUST00000200632 547 ntBASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.28■□□□□ 0.84
Ggps1Q9WTN0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Gm18025-201ENSMUST00000221733 862 ntBASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ggps1Q9WTN0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ggps1Q9WTN0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Ggps1Q9WTN0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ggps1Q9WTN0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ggps1Q9WTN0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ggps1Q9WTN0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ggps1Q9WTN0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ggps1Q9WTN0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ggps1Q9WTN0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ggps1Q9WTN0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ggps1Q9WTN0 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ggps1Q9WTN0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.26■□□□□ 0.83
Ggps1Q9WTN0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Ggps1Q9WTN0 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.26■□□□□ 0.83
Ggps1Q9WTN0 Gm42545-201ENSMUST00000202755 922 ntBASIC20.26■□□□□ 0.83
Ggps1Q9WTN0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms