Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh17Q9R100 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cdh17Q9R100 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh17Q9R100 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh17Q9R100 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cdh17Q9R100 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.86■□□□□ 0.45
Cdh17Q9R100 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdh17Q9R100 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Cdh17Q9R100 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdh17Q9R100 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh17Q9R100 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh17Q9R100 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cdh17Q9R100 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh17Q9R100 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh17Q9R100 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh17Q9R100 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdh17Q9R100 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Cdh17Q9R100 Tgds-204ENSMUST00000228543 1594 ntBASIC17.83■□□□□ 0.45
Cdh17Q9R100 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdh17Q9R100 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.83■□□□□ 0.45
Cdh17Q9R100 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Cdh17Q9R100 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh17Q9R100 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh17Q9R100 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh17Q9R100 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh17Q9R100 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh17Q9R100 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdh17Q9R100 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.82■□□□□ 0.44
Cdh17Q9R100 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.82■□□□□ 0.44
Cdh17Q9R100 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.82■□□□□ 0.44
Cdh17Q9R100 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.82■□□□□ 0.44
Cdh17Q9R100 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdh17Q9R100 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
Cdh17Q9R100 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdh17Q9R100 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh17Q9R100 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.8■□□□□ 0.44
Cdh17Q9R100 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.8■□□□□ 0.44
Cdh17Q9R100 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh17Q9R100 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.8■□□□□ 0.44
Cdh17Q9R100 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh17Q9R100 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cdh17Q9R100 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh17Q9R100 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.8■□□□□ 0.44
Cdh17Q9R100 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh17Q9R100 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdh17Q9R100 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cdh17Q9R100 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms