Protein–RNA interactions for Protein: Q9JKJ9

Cyp39a1, 24-hydroxycholesterol 7-alpha-hydroxylase, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cyp39a1Q9JKJ9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cyp39a1Q9JKJ9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 Gm6211-202ENSMUST00000167849 925 ntBASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 Mir5133-201ENSMUST00000174955 77 ntBASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cyp39a1Q9JKJ9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.7
Cyp39a1Q9JKJ9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cyp39a1Q9JKJ9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 Gm12933-201ENSMUST00000120203 872 ntBASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
Cyp39a1Q9JKJ9 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.38■□□□□ 0.69
Cyp39a1Q9JKJ9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.37■□□□□ 0.69
Cyp39a1Q9JKJ9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cyp39a1Q9JKJ9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cyp39a1Q9JKJ9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cyp39a1Q9JKJ9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cyp39a1Q9JKJ9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.36■□□□□ 0.69
Cyp39a1Q9JKJ9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cyp39a1Q9JKJ9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cyp39a1Q9JKJ9 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cyp39a1Q9JKJ9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cyp39a1Q9JKJ9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Gm13148-201ENSMUST00000118892 745 ntBASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cyp39a1Q9JKJ9 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.34■□□□□ 0.69
Cyp39a1Q9JKJ9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cyp39a1Q9JKJ9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cyp39a1Q9JKJ9 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.34■□□□□ 0.69
Cyp39a1Q9JKJ9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cyp39a1Q9JKJ9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cyp39a1Q9JKJ9 Grk6-206ENSMUST00000224995 2971 ntBASIC19.34■□□□□ 0.69
Cyp39a1Q9JKJ9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.34■□□□□ 0.69
Cyp39a1Q9JKJ9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Cyp39a1Q9JKJ9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cyp39a1Q9JKJ9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms