Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim54Q9ERP3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim54Q9ERP3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim54Q9ERP3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim54Q9ERP3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim54Q9ERP3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim54Q9ERP3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim54Q9ERP3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim54Q9ERP3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim54Q9ERP3 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.81■□□□□ 0.76
Trim54Q9ERP3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim54Q9ERP3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim54Q9ERP3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim54Q9ERP3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim54Q9ERP3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.81■□□□□ 0.76
Trim54Q9ERP3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim54Q9ERP3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trim54Q9ERP3 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Mtag2-201ENSMUST00000058665 714 ntBASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim54Q9ERP3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim54Q9ERP3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim54Q9ERP3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim54Q9ERP3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Trim54Q9ERP3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim54Q9ERP3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim54Q9ERP3 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim54Q9ERP3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim54Q9ERP3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim54Q9ERP3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim54Q9ERP3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim54Q9ERP3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim54Q9ERP3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim54Q9ERP3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Trim54Q9ERP3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim54Q9ERP3 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim54Q9ERP3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim54Q9ERP3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim54Q9ERP3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim54Q9ERP3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim54Q9ERP3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Mir1199-201ENSMUST00000117015 119 ntBASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Gm22325-201ENSMUST00000158904 308 ntBASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Trim54Q9ERP3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Trim54Q9ERP3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim54Q9ERP3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim54Q9ERP3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trim54Q9ERP3 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.74■□□□□ 0.75
Trim54Q9ERP3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Trim54Q9ERP3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.74■□□□□ 0.75
Trim54Q9ERP3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim54Q9ERP3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms