Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Rtp4Q9ER80 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rtp4Q9ER80 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Rtp4Q9ER80 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.14■□□□□ 0.33
Rtp4Q9ER80 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp4Q9ER80 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rtp4Q9ER80 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Rtp4Q9ER80 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp4Q9ER80 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rtp4Q9ER80 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rtp4Q9ER80 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.12■□□□□ 0.33
Rtp4Q9ER80 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rtp4Q9ER80 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Gm20049-201ENSMUST00000219950 730 ntBASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rtp4Q9ER80 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Gm20760-201ENSMUST00000179197 648 ntBASIC17.09■□□□□ 0.33
Rtp4Q9ER80 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.09■□□□□ 0.33
Rtp4Q9ER80 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.09■□□□□ 0.33
Rtp4Q9ER80 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rtp4Q9ER80 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms