Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 Gm37805-201ENSMUST00000192612 1094 ntBASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC21■□□□□ 0.95
Col4a3bpQ9EQG9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Col4a3bpQ9EQG9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Gm13534-201ENSMUST00000121169 513 ntBASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.98■□□□□ 0.95
Col4a3bpQ9EQG9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a3bpQ9EQG9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a3bpQ9EQG9 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a3bpQ9EQG9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a3bpQ9EQG9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a3bpQ9EQG9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Col4a3bpQ9EQG9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col4a3bpQ9EQG9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col4a3bpQ9EQG9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Col4a3bpQ9EQG9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a3bpQ9EQG9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a3bpQ9EQG9 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a3bpQ9EQG9 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a3bpQ9EQG9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a3bpQ9EQG9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col4a3bpQ9EQG9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.94■□□□□ 0.94
Col4a3bpQ9EQG9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col4a3bpQ9EQG9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms