Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.96■□□□□ 0.47
Rrp8Q9DB85 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp8Q9DB85 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Rrp8Q9DB85 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp8Q9DB85 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.96■□□□□ 0.47
Rrp8Q9DB85 Gm43183-201ENSMUST00000200632 547 ntBASIC17.96■□□□□ 0.47
Rrp8Q9DB85 Gm43799-201ENSMUST00000201845 579 ntBASIC17.96■□□□□ 0.47
Rrp8Q9DB85 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Rrp8Q9DB85 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rrp8Q9DB85 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.96■□□□□ 0.47
Rrp8Q9DB85 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Rrp8Q9DB85 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rrp8Q9DB85 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.94■□□□□ 0.46
Rrp8Q9DB85 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Rrp8Q9DB85 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.93■□□□□ 0.46
Rrp8Q9DB85 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rrp8Q9DB85 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Gm15375-201ENSMUST00000119510 849 ntBASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Gm30025-201ENSMUST00000218555 728 ntBASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rrp8Q9DB85 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Gm18025-201ENSMUST00000221733 862 ntBASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rrp8Q9DB85 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Gm10231-201ENSMUST00000181584 441 ntBASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms