Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim42Q9D2H5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim42Q9D2H5 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim42Q9D2H5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim42Q9D2H5 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim42Q9D2H5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.28■□□□□ 0.52
Trim42Q9D2H5 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.28■□□□□ 0.52
Trim42Q9D2H5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim42Q9D2H5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim42Q9D2H5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim42Q9D2H5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim42Q9D2H5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim42Q9D2H5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trim42Q9D2H5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Trim42Q9D2H5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trim42Q9D2H5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trim42Q9D2H5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trim42Q9D2H5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trim42Q9D2H5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim42Q9D2H5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms