Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cdh23Q99PF4 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Gm10138-203ENSMUST00000206952 366 ntBASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cdh23Q99PF4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Cdh23Q99PF4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh23Q99PF4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.83■□□□□ 0.61
Cdh23Q99PF4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cdh23Q99PF4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh23Q99PF4 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cdh23Q99PF4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.83■□□□□ 0.6
Cdh23Q99PF4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cdh23Q99PF4 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.83■□□□□ 0.6
Cdh23Q99PF4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cdh23Q99PF4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cdh23Q99PF4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cdh23Q99PF4 Gm17807-201ENSMUST00000186869 298 ntBASIC18.79■□□□□ 0.6
Cdh23Q99PF4 Gm18669-201ENSMUST00000216049 778 ntBASIC18.79■□□□□ 0.6
Cdh23Q99PF4 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh23Q99PF4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh23Q99PF4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh23Q99PF4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh23Q99PF4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh23Q99PF4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cdh23Q99PF4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdh23Q99PF4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.79■□□□□ 0.6
Cdh23Q99PF4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.78■□□□□ 0.6
Cdh23Q99PF4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh23Q99PF4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh23Q99PF4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh23Q99PF4 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh23Q99PF4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh23Q99PF4 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cdh23Q99PF4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.77■□□□□ 0.6
Cdh23Q99PF4 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms