Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trem2Q99NH8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Trem2Q99NH8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trem2Q99NH8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trem2Q99NH8 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
Trem2Q99NH8 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trem2Q99NH8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trem2Q99NH8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.66■□□□□ 0.58
Trem2Q99NH8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trem2Q99NH8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.65■□□□□ 0.58
Trem2Q99NH8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trem2Q99NH8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trem2Q99NH8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
Trem2Q99NH8 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.64■□□□□ 0.58
Trem2Q99NH8 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trem2Q99NH8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trem2Q99NH8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trem2Q99NH8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.64■□□□□ 0.57
Trem2Q99NH8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trem2Q99NH8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trem2Q99NH8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trem2Q99NH8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trem2Q99NH8 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Trem2Q99NH8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Trem2Q99NH8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Trem2Q99NH8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trem2Q99NH8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trem2Q99NH8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trem2Q99NH8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trem2Q99NH8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trem2Q99NH8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trem2Q99NH8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trem2Q99NH8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trem2Q99NH8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms