Protein–RNA interactions for Protein: Q99J10

Ctu1, Cytoplasmic tRNA 2-thiolation protein 1, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctu1Q99J10 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctu1Q99J10 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Ctu1Q99J10 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctu1Q99J10 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctu1Q99J10 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctu1Q99J10 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ctu1Q99J10 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Ctu1Q99J10 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC20.46■□□□□ 0.87
Ctu1Q99J10 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ctu1Q99J10 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctu1Q99J10 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctu1Q99J10 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC20.45■□□□□ 0.87
Ctu1Q99J10 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctu1Q99J10 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctu1Q99J10 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ctu1Q99J10 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.45■□□□□ 0.86
Ctu1Q99J10 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctu1Q99J10 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctu1Q99J10 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.45■□□□□ 0.86
Ctu1Q99J10 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctu1Q99J10 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctu1Q99J10 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctu1Q99J10 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctu1Q99J10 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.44■□□□□ 0.86
Ctu1Q99J10 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
Ctu1Q99J10 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctu1Q99J10 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.44■□□□□ 0.86
Ctu1Q99J10 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctu1Q99J10 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctu1Q99J10 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctu1Q99J10 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctu1Q99J10 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Ctu1Q99J10 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.43■□□□□ 0.86
Ctu1Q99J10 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Gm10819-201ENSMUST00000099988 561 ntBASIC20.43■□□□□ 0.86
Ctu1Q99J10 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctu1Q99J10 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctu1Q99J10 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ctu1Q99J10 Mir6349-201ENSMUST00000184059 97 ntBASIC20.42■□□□□ 0.86
Ctu1Q99J10 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.42■□□□□ 0.86
Ctu1Q99J10 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.42■□□□□ 0.86
Ctu1Q99J10 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctu1Q99J10 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ctu1Q99J10 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ctu1Q99J10 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.42■□□□□ 0.86
Ctu1Q99J10 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Gm6659-201ENSMUST00000174752 547 ntBASIC20.41■□□□□ 0.86
Ctu1Q99J10 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctu1Q99J10 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctu1Q99J10 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Ctu1Q99J10 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Ctu1Q99J10 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctu1Q99J10 Gm21362-201ENSMUST00000194272 928 ntBASIC20.4■□□□□ 0.86
Ctu1Q99J10 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.4■□□□□ 0.86
Ctu1Q99J10 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctu1Q99J10 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctu1Q99J10 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctu1Q99J10 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctu1Q99J10 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctu1Q99J10 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.4■□□□□ 0.86
Ctu1Q99J10 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ctu1Q99J10 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctu1Q99J10 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctu1Q99J10 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctu1Q99J10 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctu1Q99J10 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.39■□□□□ 0.85
Ctu1Q99J10 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctu1Q99J10 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctu1Q99J10 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.38■□□□□ 0.85
Ctu1Q99J10 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ctu1Q99J10 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ctu1Q99J10 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ctu1Q99J10 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ctu1Q99J10 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.38■□□□□ 0.85
Ctu1Q99J10 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Ctu1Q99J10 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms