Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp1aQ921W0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Golgb1-201ENSMUST00000023534 498 ntBASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chmp1aQ921W0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Chmp1aQ921W0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Chmp1aQ921W0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Chmp1aQ921W0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Chmp1aQ921W0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp1aQ921W0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms