Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha9Q91Y11 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha9Q91Y11 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Gm44549-201ENSMUST00000208351 577 ntBASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha9Q91Y11 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdha9Q91Y11 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 Gm4968-201ENSMUST00000071458 858 ntBASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Pcdha9Q91Y11 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdha9Q91Y11 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdha9Q91Y11 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.43■□□□□ 0.7
Pcdha9Q91Y11 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms