Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Gm10493-201ENSMUST00000097270 612 ntBASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhac1Q91Y10 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhac1Q91Y10 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdhac1Q91Y10 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdhac1Q91Y10 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Gm18284-201ENSMUST00000172604 624 ntBASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhac1Q91Y10 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms