Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdhb5Q91XZ5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb5Q91XZ5 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb5Q91XZ5 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb5Q91XZ5 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb5Q91XZ5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb5Q91XZ5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb5Q91XZ5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 Gm37805-201ENSMUST00000192612 1094 ntBASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb5Q91XZ5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb5Q91XZ5 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb5Q91XZ5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdhb5Q91XZ5 Gm18025-201ENSMUST00000221733 862 ntBASIC21.63■■□□□ 1.05
Pcdhb5Q91XZ5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb5Q91XZ5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Gm42545-201ENSMUST00000202755 922 ntBASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Gm5417-201ENSMUST00000079706 384 ntBASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb5Q91XZ5 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb5Q91XZ5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb5Q91XZ5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb5Q91XZ5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb5Q91XZ5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb5Q91XZ5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pcdhb5Q91XZ5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pcdhb5Q91XZ5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb5Q91XZ5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb5Q91XZ5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb5Q91XZ5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Pcdhb5Q91XZ5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Pcdhb5Q91XZ5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb5Q91XZ5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb5Q91XZ5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb5Q91XZ5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb5Q91XZ5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhb5Q91XZ5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Pcdhb5Q91XZ5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Pcdhb5Q91XZ5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms