Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pcdhb6Q91XZ4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pcdhb6Q91XZ4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb6Q91XZ4 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb6Q91XZ4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pcdhb6Q91XZ4 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.83■□□□□ 0.61
Pcdhb6Q91XZ4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhb6Q91XZ4 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb6Q91XZ4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb6Q91XZ4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.83■□□□□ 0.6
Pcdhb6Q91XZ4 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pcdhb6Q91XZ4 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb6Q91XZ4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb6Q91XZ4 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Gm6211-202ENSMUST00000167849 925 ntBASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Gm7291-201ENSMUST00000199147 382 ntBASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Pcdhb6Q91XZ4 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhb6Q91XZ4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 Tgds-204ENSMUST00000228543 1594 ntBASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms