Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Gm6659-201ENSMUST00000174752 547 ntBASIC18.13■□□□□ 0.49
Vsx1Q91V10 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Vsx1Q91V10 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Vsx1Q91V10 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Vsx1Q91V10 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Gm21814-202ENSMUST00000203277 873 ntBASIC18.11■□□□□ 0.49
Vsx1Q91V10 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Vsx1Q91V10 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vsx1Q91V10 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vsx1Q91V10 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Vsx1Q91V10 Gm11927-201ENSMUST00000118472 759 ntBASIC18.1■□□□□ 0.49
Vsx1Q91V10 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vsx1Q91V10 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vsx1Q91V10 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.1■□□□□ 0.49
Vsx1Q91V10 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.1■□□□□ 0.49
Vsx1Q91V10 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vsx1Q91V10 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Vsx1Q91V10 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vsx1Q91V10 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Vsx1Q91V10 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Gm13559-201ENSMUST00000120476 863 ntBASIC18.09■□□□□ 0.49
Vsx1Q91V10 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Vsx1Q91V10 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.09■□□□□ 0.49
Vsx1Q91V10 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Vsx1Q91V10 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vsx1Q91V10 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vsx1Q91V10 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Vsx1Q91V10 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Vsx1Q91V10 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.08■□□□□ 0.48
Vsx1Q91V10 Gm11539-201ENSMUST00000119837 557 ntBASIC18.08■□□□□ 0.48
Vsx1Q91V10 Gm13436-201ENSMUST00000120418 567 ntBASIC18.08■□□□□ 0.48
Vsx1Q91V10 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.08■□□□□ 0.48
Vsx1Q91V10 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.08■□□□□ 0.48
Vsx1Q91V10 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.08■□□□□ 0.48
Vsx1Q91V10 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vsx1Q91V10 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Vsx1Q91V10 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vsx1Q91V10 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vsx1Q91V10 Gm7889-201ENSMUST00000185591 958 ntBASIC18.07■□□□□ 0.48
Vsx1Q91V10 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vsx1Q91V10 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vsx1Q91V10 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.07■□□□□ 0.48
Vsx1Q91V10 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vsx1Q91V10 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms