Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdhr1Q8VHP6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdhr1Q8VHP6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cdhr1Q8VHP6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cdhr1Q8VHP6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Gm11927-201ENSMUST00000118472 759 ntBASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Gm6576-201ENSMUST00000169678 883 ntBASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cdhr1Q8VHP6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr1Q8VHP6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.84■□□□□ 0.45
Cdhr1Q8VHP6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.84■□□□□ 0.45
Cdhr1Q8VHP6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.84■□□□□ 0.45
Cdhr1Q8VHP6 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr1Q8VHP6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.84■□□□□ 0.45
Cdhr1Q8VHP6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr1Q8VHP6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.84■□□□□ 0.45
Cdhr1Q8VHP6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cdhr1Q8VHP6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdhr1Q8VHP6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdhr1Q8VHP6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdhr1Q8VHP6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.83■□□□□ 0.45
Cdhr1Q8VHP6 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Gm15378-201ENSMUST00000121894 207 ntBASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdhr1Q8VHP6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Gm22325-201ENSMUST00000158904 308 ntBASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdhr1Q8VHP6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdhr1Q8VHP6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cdhr1Q8VHP6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr1Q8VHP6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr1Q8VHP6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr1Q8VHP6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cdhr1Q8VHP6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cdhr1Q8VHP6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms