Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sh3kbp1Q8R550 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sh3kbp1Q8R550 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Trmt13-210ENSMUST00000198454 880 ntBASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sh3kbp1Q8R550 Rarb-207ENSMUST00000225921 2756 ntBASIC18.83■□□□□ 0.61
Sh3kbp1Q8R550 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3kbp1Q8R550 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3kbp1Q8R550 BC021767-201ENSMUST00000126387 1716 ntBASIC18.83■□□□□ 0.61
Sh3kbp1Q8R550 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3kbp1Q8R550 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3kbp1Q8R550 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.83■□□□□ 0.61
Sh3kbp1Q8R550 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sh3kbp1Q8R550 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sh3kbp1Q8R550 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sh3kbp1Q8R550 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sh3kbp1Q8R550 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sh3kbp1Q8R550 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms