Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Slf1Q8R3P9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Slf1Q8R3P9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Gm21956-201ENSMUST00000179946 522 ntBASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.48■□□□□ 0.55
Slf1Q8R3P9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Slf1Q8R3P9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.46■□□□□ 0.55
Slf1Q8R3P9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Slf1Q8R3P9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Slf1Q8R3P9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Slf1Q8R3P9 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.45■□□□□ 0.54
Slf1Q8R3P9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slf1Q8R3P9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slf1Q8R3P9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Slf1Q8R3P9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slf1Q8R3P9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slf1Q8R3P9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slf1Q8R3P9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slf1Q8R3P9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.45■□□□□ 0.54
Slf1Q8R3P9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Slf1Q8R3P9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Slf1Q8R3P9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slf1Q8R3P9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slf1Q8R3P9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Slf1Q8R3P9 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slf1Q8R3P9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Slf1Q8R3P9 Gm43137-201ENSMUST00000198052 594 ntBASIC18.43■□□□□ 0.54
Slf1Q8R3P9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slf1Q8R3P9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Slf1Q8R3P9 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Slf1Q8R3P9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms