Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Rarb-207ENSMUST00000225921 2756 ntBASIC18.23■□□□□ 0.51
Zcchc9Q8R1J3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Gm2399-201ENSMUST00000104944 225 ntBASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Gm18666-201ENSMUST00000190039 958 ntBASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Zcchc9Q8R1J3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Gm13836-201ENSMUST00000121159 501 ntBASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Gm7977-201ENSMUST00000193787 748 ntBASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Zcchc9Q8R1J3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
Zcchc9Q8R1J3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Zcchc9Q8R1J3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Zcchc9Q8R1J3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Gm715-201ENSMUST00000117865 831 ntBASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.19■□□□□ 0.5
Zcchc9Q8R1J3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Gm10698-201ENSMUST00000182663 604 ntBASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Zcchc9Q8R1J3 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms