Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim31Q8R0K2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Grk6-206ENSMUST00000224995 2971 ntBASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim31Q8R0K2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Gm6420-201ENSMUST00000193885 723 ntBASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim31Q8R0K2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim31Q8R0K2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Gm12933-201ENSMUST00000120203 872 ntBASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Nespas-201ENSMUST00000143738 1083 ntBASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trim31Q8R0K2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Gm42555-201ENSMUST00000199304 1039 ntBASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim31Q8R0K2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim31Q8R0K2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trim31Q8R0K2 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.83■□□□□ 0.45
Trim31Q8R0K2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim31Q8R0K2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim31Q8R0K2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Trim31Q8R0K2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.83■□□□□ 0.44
Trim31Q8R0K2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim31Q8R0K2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim31Q8R0K2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim31Q8R0K2 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.83■□□□□ 0.44
Trim31Q8R0K2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim31Q8R0K2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms