Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.7■□□□□ 0.26
Ebf4Q8K4J2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ebf4Q8K4J2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ebf4Q8K4J2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ebf4Q8K4J2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ebf4Q8K4J2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ebf4Q8K4J2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Ebf4Q8K4J2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ebf4Q8K4J2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.26
Ebf4Q8K4J2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ebf4Q8K4J2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms