Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Gm5828-201ENSMUST00000071842 1860 ntBASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccdc87Q8CDL9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc87Q8CDL9 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.41■□□□□ 0.7
Ccdc87Q8CDL9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Ccdc87Q8CDL9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Ccdc87Q8CDL9 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc87Q8CDL9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc87Q8CDL9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc87Q8CDL9 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.39■□□□□ 0.69
Ccdc87Q8CDL9 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.39■□□□□ 0.69
Ccdc87Q8CDL9 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.39■□□□□ 0.69
Ccdc87Q8CDL9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc87Q8CDL9 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.39■□□□□ 0.69
Ccdc87Q8CDL9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Ccdc87Q8CDL9 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc87Q8CDL9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc87Q8CDL9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 Gm27801-201ENSMUST00000184174 223 ntBASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc87Q8CDL9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms