Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cpsf4Q8BQZ5 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpsf4Q8BQZ5 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpsf4Q8BQZ5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpsf4Q8BQZ5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cpsf4Q8BQZ5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Cpsf4Q8BQZ5 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.77■□□□□ 0.44
Cpsf4Q8BQZ5 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.77■□□□□ 0.44
Cpsf4Q8BQZ5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpsf4Q8BQZ5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpsf4Q8BQZ5 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpsf4Q8BQZ5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cpsf4Q8BQZ5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Cpsf4Q8BQZ5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cpsf4Q8BQZ5 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.75■□□□□ 0.43
Cpsf4Q8BQZ5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Gm13534-201ENSMUST00000121169 513 ntBASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cpsf4Q8BQZ5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cpsf4Q8BQZ5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.72■□□□□ 0.43
Cpsf4Q8BQZ5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cpsf4Q8BQZ5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms