Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rnf38Q8BI21 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf38Q8BI21 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf38Q8BI21 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.65■□□□□ 0.42
Rnf38Q8BI21 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf38Q8BI21 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf38Q8BI21 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf38Q8BI21 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf38Q8BI21 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rnf38Q8BI21 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rnf38Q8BI21 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.64■□□□□ 0.42
Rnf38Q8BI21 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 CT010467.1-202ENSMUST00000205406 714 ntBASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.64■□□□□ 0.41
Rnf38Q8BI21 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rnf38Q8BI21 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rnf38Q8BI21 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf38Q8BI21 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf38Q8BI21 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Rnf38Q8BI21 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf38Q8BI21 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.62■□□□□ 0.41
Rnf38Q8BI21 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf38Q8BI21 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf38Q8BI21 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.62■□□□□ 0.41
Rnf38Q8BI21 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rnf38Q8BI21 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rnf38Q8BI21 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rnf38Q8BI21 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rnf38Q8BI21 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms