Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrrtm4Q80XG9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.87■□□□□ 0.45
Lrrtm4Q80XG9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Lrrtm4Q80XG9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
Lrrtm4Q80XG9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Lrrtm4Q80XG9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Gm2399-201ENSMUST00000104944 225 ntBASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Lrrtm4Q80XG9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Gm20760-201ENSMUST00000179197 648 ntBASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.85■□□□□ 0.45
Lrrtm4Q80XG9 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Lrrtm4Q80XG9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lrrtm4Q80XG9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.83■□□□□ 0.45
Lrrtm4Q80XG9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 Gm37856-201ENSMUST00000191634 999 ntBASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 Trmt13-210ENSMUST00000198454 880 ntBASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lrrtm4Q80XG9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Dio3-201ENSMUST00000097228 1449 ntBASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lrrtm4Q80XG9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Gm27275-201ENSMUST00000184318 272 ntBASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lrrtm4Q80XG9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lrrtm4Q80XG9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms