Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ShprhQ7TPQ3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC26.28■■□□□ 1.8
ShprhQ7TPQ3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ShprhQ7TPQ3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ShprhQ7TPQ3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
ShprhQ7TPQ3 Gm6277-202ENSMUST00000224036 2779 ntBASIC26.28■■□□□ 1.8
ShprhQ7TPQ3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
ShprhQ7TPQ3 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ShprhQ7TPQ3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
ShprhQ7TPQ3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ShprhQ7TPQ3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ShprhQ7TPQ3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC26.26■■□□□ 1.79
ShprhQ7TPQ3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ShprhQ7TPQ3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
ShprhQ7TPQ3 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ShprhQ7TPQ3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ShprhQ7TPQ3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ShprhQ7TPQ3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ShprhQ7TPQ3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ShprhQ7TPQ3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
ShprhQ7TPQ3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
ShprhQ7TPQ3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ShprhQ7TPQ3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC26.24■■□□□ 1.79
ShprhQ7TPQ3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ShprhQ7TPQ3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ShprhQ7TPQ3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
ShprhQ7TPQ3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ShprhQ7TPQ3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
ShprhQ7TPQ3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ShprhQ7TPQ3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
ShprhQ7TPQ3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC26.22■■□□□ 1.79
ShprhQ7TPQ3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC26.22■■□□□ 1.79
ShprhQ7TPQ3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ShprhQ7TPQ3 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
ShprhQ7TPQ3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ShprhQ7TPQ3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
ShprhQ7TPQ3 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ShprhQ7TPQ3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ShprhQ7TPQ3 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ShprhQ7TPQ3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Hsf1-204ENSMUST00000226872 2104 ntBASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Gm10459-201ENSMUST00000202708 1155 ntBASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC26.21■■□□□ 1.79
ShprhQ7TPQ3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ShprhQ7TPQ3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ShprhQ7TPQ3 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
ShprhQ7TPQ3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ShprhQ7TPQ3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC26.19■■□□□ 1.78
ShprhQ7TPQ3 Gm18959-201ENSMUST00000208954 655 ntBASIC26.19■■□□□ 1.78
ShprhQ7TPQ3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC26.19■■□□□ 1.78
ShprhQ7TPQ3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ShprhQ7TPQ3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ShprhQ7TPQ3 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
ShprhQ7TPQ3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC26.19■■□□□ 1.78
ShprhQ7TPQ3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
ShprhQ7TPQ3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ShprhQ7TPQ3 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ShprhQ7TPQ3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ShprhQ7TPQ3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ShprhQ7TPQ3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ShprhQ7TPQ3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
ShprhQ7TPQ3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC26.18■■□□□ 1.78
ShprhQ7TPQ3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ShprhQ7TPQ3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ShprhQ7TPQ3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ShprhQ7TPQ3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ShprhQ7TPQ3 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ShprhQ7TPQ3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ShprhQ7TPQ3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ShprhQ7TPQ3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ShprhQ7TPQ3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 Gm38345-201ENSMUST00000192635 1748 ntBASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ShprhQ7TPQ3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ShprhQ7TPQ3 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ShprhQ7TPQ3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ShprhQ7TPQ3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ShprhQ7TPQ3 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ShprhQ7TPQ3 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ShprhQ7TPQ3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
ShprhQ7TPQ3 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC26.15■■□□□ 1.78
ShprhQ7TPQ3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
ShprhQ7TPQ3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms