Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.51■□□□□ 0.87
Hdac4Q6NZM9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.51■□□□□ 0.87
Hdac4Q6NZM9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac4Q6NZM9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac4Q6NZM9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.51■□□□□ 0.87
Hdac4Q6NZM9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac4Q6NZM9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hdac4Q6NZM9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Gm6365-201ENSMUST00000054711 744 ntBASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Hdac4Q6NZM9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Hdac4Q6NZM9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac4Q6NZM9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.49■□□□□ 0.87
Hdac4Q6NZM9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Hdac4Q6NZM9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Hdac4Q6NZM9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac4Q6NZM9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac4Q6NZM9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac4Q6NZM9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hdac4Q6NZM9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hdac4Q6NZM9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Tgds-204ENSMUST00000228543 1594 ntBASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Gm27405-201ENSMUST00000184201 112 ntBASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hdac4Q6NZM9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac4Q6NZM9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac4Q6NZM9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.46■□□□□ 0.87
Hdac4Q6NZM9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.46■□□□□ 0.87
Hdac4Q6NZM9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac4Q6NZM9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac4Q6NZM9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Hdac4Q6NZM9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac4Q6NZM9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hdac4Q6NZM9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Gm7290-201ENSMUST00000104990 617 ntBASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Gm12918-201ENSMUST00000120234 636 ntBASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Gm15710-201ENSMUST00000121821 636 ntBASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Gm5075-201ENSMUST00000196916 622 ntBASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hdac4Q6NZM9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Gm6211-202ENSMUST00000167849 925 ntBASIC20.44■□□□□ 0.86
Hdac4Q6NZM9 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms