Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Six1Q62231 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.85■□□□□ 0.61
Six1Q62231 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Six1Q62231 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Six1Q62231 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Six1Q62231 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six1Q62231 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Six1Q62231 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six1Q62231 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six1Q62231 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Six1Q62231 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.84■□□□□ 0.61
Six1Q62231 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Gm13234-201ENSMUST00000120010 747 ntBASIC18.84■□□□□ 0.61
Six1Q62231 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.84■□□□□ 0.61
Six1Q62231 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Six1Q62231 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.84■□□□□ 0.61
Six1Q62231 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six1Q62231 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Six1Q62231 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Six1Q62231 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Six1Q62231 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Six1Q62231 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.83■□□□□ 0.6
Six1Q62231 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Six1Q62231 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Six1Q62231 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Six1Q62231 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six1Q62231 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six1Q62231 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six1Q62231 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six1Q62231 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Six1Q62231 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.83■□□□□ 0.6
Six1Q62231 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Six1Q62231 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Six1Q62231 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.82■□□□□ 0.6
Six1Q62231 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Six1Q62231 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Six1Q62231 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Six1Q62231 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Six1Q62231 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Six1Q62231 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Six1Q62231 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Six1Q62231 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six1Q62231 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six1Q62231 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Six1Q62231 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.81■□□□□ 0.6
Six1Q62231 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Six1Q62231 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six1Q62231 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six1Q62231 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six1Q62231 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Six1Q62231 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Six1Q62231 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six1Q62231 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.8■□□□□ 0.6
Six1Q62231 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six1Q62231 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six1Q62231 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six1Q62231 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.8■□□□□ 0.6
Six1Q62231 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.8■□□□□ 0.6
Six1Q62231 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six1Q62231 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Six1Q62231 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Six1Q62231 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.79■□□□□ 0.6
Six1Q62231 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.79■□□□□ 0.6
Six1Q62231 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Six1Q62231 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Six1Q62231 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms