Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scarb1Q61009 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Scarb1Q61009 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scarb1Q61009 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Scarb1Q61009 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scarb1Q61009 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scarb1Q61009 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.43■□□□□ 0.06
Scarb1Q61009 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scarb1Q61009 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scarb1Q61009 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Scarb1Q61009 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Scarb1Q61009 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.42■□□□□ 0.06
Scarb1Q61009 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Scarb1Q61009 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Scarb1Q61009 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.41■□□□□ 0.06
Scarb1Q61009 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Scarb1Q61009 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.41■□□□□ 0.06
Scarb1Q61009 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Scarb1Q61009 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Scarb1Q61009 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.4■□□□□ 0.06
Scarb1Q61009 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
Scarb1Q61009 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.4■□□□□ 0.06
Scarb1Q61009 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.4■□□□□ 0.06
Scarb1Q61009 Gm45102-201ENSMUST00000207427 857 ntBASIC15.4■□□□□ 0.06
Scarb1Q61009 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.4■□□□□ 0.06
Scarb1Q61009 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.4■□□□□ 0.06
Scarb1Q61009 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.4■□□□□ 0.06
Scarb1Q61009 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Scarb1Q61009 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.39■□□□□ 0.06
Scarb1Q61009 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Gm14117-201ENSMUST00000122417 843 ntBASIC15.39■□□□□ 0.05
Scarb1Q61009 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Scarb1Q61009 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Scarb1Q61009 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Scarb1Q61009 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scarb1Q61009 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scarb1Q61009 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Scarb1Q61009 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Scarb1Q61009 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.38■□□□□ 0.05
Scarb1Q61009 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Scarb1Q61009 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Scarb1Q61009 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scarb1Q61009 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scarb1Q61009 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.38■□□□□ 0.05
Scarb1Q61009 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scarb1Q61009 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Scarb1Q61009 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scarb1Q61009 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Scarb1Q61009 Gm12922-201ENSMUST00000120626 809 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms