Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfaip3Q60769 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Gm22325-201ENSMUST00000158904 308 ntBASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.17■□□□□ 0.34
Tnfaip3Q60769 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Tnfaip3Q60769 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.16■□□□□ 0.34
Tnfaip3Q60769 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Gm12896-201ENSMUST00000118430 226 ntBASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Gm37856-201ENSMUST00000191634 999 ntBASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tnfaip3Q60769 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Trmt13-210ENSMUST00000198454 880 ntBASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tnfaip3Q60769 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Tnfaip3Q60769 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Dio3-201ENSMUST00000097228 1449 ntBASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tnfaip3Q60769 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms