Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Trim41Q5NCC3 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Trim41Q5NCC3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Trim41Q5NCC3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Trim41Q5NCC3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC31.91■■■□□ 2.7
Trim41Q5NCC3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Trim41Q5NCC3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Trim41Q5NCC3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Trim41Q5NCC3 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Trim41Q5NCC3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Trim41Q5NCC3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Trim41Q5NCC3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Trim41Q5NCC3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Trim41Q5NCC3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC31.9■■■□□ 2.7
Trim41Q5NCC3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC31.9■■■□□ 2.7
Trim41Q5NCC3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC31.9■■■□□ 2.7
Trim41Q5NCC3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
Trim41Q5NCC3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Trim41Q5NCC3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Trim41Q5NCC3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
Trim41Q5NCC3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Trim41Q5NCC3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Trim41Q5NCC3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Trim41Q5NCC3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Trim41Q5NCC3 Gm33142-201ENSMUST00000193913 867 ntBASIC31.89■■■□□ 2.7
Trim41Q5NCC3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Trim41Q5NCC3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Trim41Q5NCC3 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC31.89■■■□□ 2.7
Trim41Q5NCC3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC31.89■■■□□ 2.69
Trim41Q5NCC3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.69
Trim41Q5NCC3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Trim41Q5NCC3 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Trim41Q5NCC3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC31.88■■■□□ 2.69
Trim41Q5NCC3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Trim41Q5NCC3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Trim41Q5NCC3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Trim41Q5NCC3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
Trim41Q5NCC3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
Trim41Q5NCC3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Trim41Q5NCC3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Trim41Q5NCC3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Trim41Q5NCC3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Trim41Q5NCC3 Gm17971-201ENSMUST00000190239 806 ntBASIC31.85■■■□□ 2.69
Trim41Q5NCC3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Trim41Q5NCC3 Mtag2-201ENSMUST00000058665 714 ntBASIC31.85■■■□□ 2.69
Trim41Q5NCC3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Trim41Q5NCC3 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Trim41Q5NCC3 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Trim41Q5NCC3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Trim41Q5NCC3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Trim41Q5NCC3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Trim41Q5NCC3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Trim41Q5NCC3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Trim41Q5NCC3 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Trim41Q5NCC3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
Trim41Q5NCC3 Gm18688-201ENSMUST00000204695 1859 ntBASIC31.83■■■□□ 2.69
Trim41Q5NCC3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC31.83■■■□□ 2.69
Trim41Q5NCC3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
Trim41Q5NCC3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Trim41Q5NCC3 Gm23634-201ENSMUST00000175071 91 ntBASIC31.82■■■□□ 2.68
Trim41Q5NCC3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Trim41Q5NCC3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Trim41Q5NCC3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Trim41Q5NCC3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Trim41Q5NCC3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
Trim41Q5NCC3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Trim41Q5NCC3 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Trim41Q5NCC3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC31.8■■■□□ 2.68
Trim41Q5NCC3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC31.8■■■□□ 2.68
Trim41Q5NCC3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Trim41Q5NCC3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Trim41Q5NCC3 Gm6345-202ENSMUST00000180900 204 ntBASIC31.8■■■□□ 2.68
Trim41Q5NCC3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Trim41Q5NCC3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
Trim41Q5NCC3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Trim41Q5NCC3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Trim41Q5NCC3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC31.79■■■□□ 2.68
Trim41Q5NCC3 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Trim41Q5NCC3 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC31.79■■■□□ 2.68
Trim41Q5NCC3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC31.79■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms