Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Arhgef40Q3UPH7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Arhgef40Q3UPH7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
Arhgef40Q3UPH7 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Arhgef40Q3UPH7 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC27.22■■□□□ 1.95
Arhgef40Q3UPH7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Arhgef40Q3UPH7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 AC166341.7-201ENSMUST00000221698 126 ntBASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Arhgef40Q3UPH7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Arhgef40Q3UPH7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Arhgef40Q3UPH7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Arhgef40Q3UPH7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Arhgef40Q3UPH7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Arhgef40Q3UPH7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
Arhgef40Q3UPH7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC27.2■■□□□ 1.94
Arhgef40Q3UPH7 Gm6659-201ENSMUST00000174752 547 ntBASIC27.19■■□□□ 1.94
Arhgef40Q3UPH7 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Arhgef40Q3UPH7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Arhgef40Q3UPH7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
Arhgef40Q3UPH7 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
Arhgef40Q3UPH7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
Arhgef40Q3UPH7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Arhgef40Q3UPH7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Arhgef40Q3UPH7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Arhgef40Q3UPH7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Arhgef40Q3UPH7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC27.18■■□□□ 1.94
Arhgef40Q3UPH7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Arhgef40Q3UPH7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Arhgef40Q3UPH7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Arhgef40Q3UPH7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC27.17■■□□□ 1.94
Arhgef40Q3UPH7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Arhgef40Q3UPH7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Arhgef40Q3UPH7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Arhgef40Q3UPH7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Arhgef40Q3UPH7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Arhgef40Q3UPH7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Arhgef40Q3UPH7 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Arhgef40Q3UPH7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Arhgef40Q3UPH7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC27.15■■□□□ 1.94
Arhgef40Q3UPH7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Arhgef40Q3UPH7 Gm6728-201ENSMUST00000178117 1065 ntBASIC27.15■■□□□ 1.94
Arhgef40Q3UPH7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Arhgef40Q3UPH7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Arhgef40Q3UPH7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
Arhgef40Q3UPH7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
Arhgef40Q3UPH7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC27.14■■□□□ 1.94
Arhgef40Q3UPH7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Arhgef40Q3UPH7 Gm10517-202ENSMUST00000192970 758 ntBASIC27.14■■□□□ 1.94
Arhgef40Q3UPH7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC27.14■■□□□ 1.94
Arhgef40Q3UPH7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
Arhgef40Q3UPH7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Arhgef40Q3UPH7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Arhgef40Q3UPH7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Arhgef40Q3UPH7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Arhgef40Q3UPH7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
Arhgef40Q3UPH7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef40Q3UPH7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef40Q3UPH7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef40Q3UPH7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef40Q3UPH7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC27.13■■□□□ 1.93
Arhgef40Q3UPH7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef40Q3UPH7 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef40Q3UPH7 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
Arhgef40Q3UPH7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Arhgef40Q3UPH7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Arhgef40Q3UPH7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC27.12■■□□□ 1.93
Arhgef40Q3UPH7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Arhgef40Q3UPH7 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Arhgef40Q3UPH7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Arhgef40Q3UPH7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Arhgef40Q3UPH7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms