Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Naf1Q3UMQ8 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Naf1Q3UMQ8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Naf1Q3UMQ8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Naf1Q3UMQ8 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Naf1Q3UMQ8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Naf1Q3UMQ8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Naf1Q3UMQ8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Naf1Q3UMQ8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Naf1Q3UMQ8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Naf1Q3UMQ8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Naf1Q3UMQ8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Naf1Q3UMQ8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Naf1Q3UMQ8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Naf1Q3UMQ8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Naf1Q3UMQ8 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Naf1Q3UMQ8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Gm22325-201ENSMUST00000158904 308 ntBASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Gm10698-201ENSMUST00000182663 604 ntBASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Naf1Q3UMQ8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Gm11927-201ENSMUST00000118472 759 ntBASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Naf1Q3UMQ8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Naf1Q3UMQ8 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Naf1Q3UMQ8 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Naf1Q3UMQ8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Naf1Q3UMQ8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Naf1Q3UMQ8 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.55■□□□□ 0.56
Naf1Q3UMQ8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Naf1Q3UMQ8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.55■□□□□ 0.56
Naf1Q3UMQ8 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Naf1Q3UMQ8 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.55■□□□□ 0.56
Naf1Q3UMQ8 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Naf1Q3UMQ8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms