Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.53■□□□□ 0.24
Chd8Q09XV5 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chd8Q09XV5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chd8Q09XV5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd8Q09XV5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chd8Q09XV5 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chd8Q09XV5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd8Q09XV5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd8Q09XV5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chd8Q09XV5 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Chd8Q09XV5 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chd8Q09XV5 Gm10418-201ENSMUST00000100943 576 ntBASIC16.52■□□□□ 0.23
Chd8Q09XV5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.52■□□□□ 0.23
Chd8Q09XV5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd8Q09XV5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.52■□□□□ 0.23
Chd8Q09XV5 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd8Q09XV5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Chd8Q09XV5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
Chd8Q09XV5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chd8Q09XV5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Chd8Q09XV5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chd8Q09XV5 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd8Q09XV5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd8Q09XV5 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.51■□□□□ 0.23
Chd8Q09XV5 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chd8Q09XV5 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chd8Q09XV5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd8Q09XV5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd8Q09XV5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd8Q09XV5 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chd8Q09XV5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chd8Q09XV5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd8Q09XV5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.5■□□□□ 0.23
Chd8Q09XV5 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.5■□□□□ 0.23
Chd8Q09XV5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd8Q09XV5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd8Q09XV5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd8Q09XV5 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Chd8Q09XV5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.5■□□□□ 0.23
Chd8Q09XV5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd8Q09XV5 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Chd8Q09XV5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.5■□□□□ 0.23
Chd8Q09XV5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Chd8Q09XV5 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Chd8Q09XV5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Gm45328-201ENSMUST00000210942 917 ntBASIC16.48■□□□□ 0.23
Chd8Q09XV5 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Gm1401-201ENSMUST00000122048 772 ntBASIC16.48■□□□□ 0.23
Chd8Q09XV5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.48■□□□□ 0.23
Chd8Q09XV5 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chd8Q09XV5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd8Q09XV5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chd8Q09XV5 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd8Q09XV5 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd8Q09XV5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd8Q09XV5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.47■□□□□ 0.23
Chd8Q09XV5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chd8Q09XV5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd8Q09XV5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chd8Q09XV5 Gm11355-201ENSMUST00000121120 306 ntBASIC16.46■□□□□ 0.23
Chd8Q09XV5 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.46■□□□□ 0.23
Chd8Q09XV5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.46■□□□□ 0.23
Chd8Q09XV5 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chd8Q09XV5 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms