Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Lsm3P62311 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.76■□□□□ 0.27
Lsm3P62311 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lsm3P62311 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Lsm3P62311 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Lsm3P62311 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.75■□□□□ 0.27
Lsm3P62311 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.75■□□□□ 0.27
Lsm3P62311 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.75■□□□□ 0.27
Lsm3P62311 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.75■□□□□ 0.27
Lsm3P62311 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Lsm3P62311 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.75■□□□□ 0.27
Lsm3P62311 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lsm3P62311 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Lsm3P62311 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm3P62311 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm3P62311 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.74■□□□□ 0.27
Lsm3P62311 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.74■□□□□ 0.27
Lsm3P62311 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm3P62311 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.74■□□□□ 0.27
Lsm3P62311 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.74■□□□□ 0.27
Lsm3P62311 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm3P62311 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.74■□□□□ 0.27
Lsm3P62311 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm3P62311 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lsm3P62311 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Lsm3P62311 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.73■□□□□ 0.27
Lsm3P62311 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm3P62311 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm3P62311 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.73■□□□□ 0.27
Lsm3P62311 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm3P62311 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm3P62311 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.73■□□□□ 0.27
Lsm3P62311 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm3P62311 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm3P62311 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Lsm3P62311 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.73■□□□□ 0.27
Lsm3P62311 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.73■□□□□ 0.27
Lsm3P62311 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm3P62311 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lsm3P62311 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Lsm3P62311 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lsm3P62311 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.72■□□□□ 0.27
Lsm3P62311 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm3P62311 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm3P62311 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Lsm3P62311 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Lsm3P62311 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm3P62311 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm3P62311 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm3P62311 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm3P62311 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.72■□□□□ 0.27
Lsm3P62311 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm3P62311 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm3P62311 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm3P62311 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lsm3P62311 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lsm3P62311 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.71■□□□□ 0.27
Lsm3P62311 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.71■□□□□ 0.27
Lsm3P62311 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Gm9870-201ENSMUST00000063874 645 ntBASIC16.71■□□□□ 0.27
Lsm3P62311 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lsm3P62311 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Lsm3P62311 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
Lsm3P62311 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
Lsm3P62311 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.7■□□□□ 0.26
Lsm3P62311 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.7■□□□□ 0.26
Lsm3P62311 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.7■□□□□ 0.26
Lsm3P62311 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm3P62311 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm3P62311 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lsm3P62311 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms