Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Gm5408-201ENSMUST00000197998 747 ntBASIC18.34■□□□□ 0.53
Lim2P56563 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.34■□□□□ 0.53
Lim2P56563 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lim2P56563 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lim2P56563 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lim2P56563 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.34■□□□□ 0.53
Lim2P56563 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Lim2P56563 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.34■□□□□ 0.53
Lim2P56563 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lim2P56563 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lim2P56563 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lim2P56563 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.33■□□□□ 0.53
Lim2P56563 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Lim2P56563 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Lim2P56563 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.33■□□□□ 0.52
Lim2P56563 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lim2P56563 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.33■□□□□ 0.52
Lim2P56563 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.33■□□□□ 0.52
Lim2P56563 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lim2P56563 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Lim2P56563 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.32■□□□□ 0.52
Lim2P56563 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Lim2P56563 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.32■□□□□ 0.52
Lim2P56563 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lim2P56563 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lim2P56563 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lim2P56563 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Lim2P56563 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Lim2P56563 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lim2P56563 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lim2P56563 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lim2P56563 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lim2P56563 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Lim2P56563 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lim2P56563 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.32■□□□□ 0.52
Lim2P56563 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lim2P56563 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lim2P56563 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lim2P56563 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Lim2P56563 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lim2P56563 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Lim2P56563 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.31■□□□□ 0.52
Lim2P56563 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.31■□□□□ 0.52
Lim2P56563 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.31■□□□□ 0.52
Lim2P56563 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.31■□□□□ 0.52
Lim2P56563 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.31■□□□□ 0.52
Lim2P56563 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.31■□□□□ 0.52
Lim2P56563 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lim2P56563 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lim2P56563 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lim2P56563 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lim2P56563 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lim2P56563 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Lim2P56563 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Lim2P56563 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.31■□□□□ 0.52
Lim2P56563 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.31■□□□□ 0.52
Lim2P56563 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lim2P56563 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Lim2P56563 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lim2P56563 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lim2P56563 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lim2P56563 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lim2P56563 Grk6-206ENSMUST00000224995 2971 ntBASIC18.3■□□□□ 0.52
Lim2P56563 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Lim2P56563 Gm4968-201ENSMUST00000071458 858 ntBASIC18.3■□□□□ 0.52
Lim2P56563 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lim2P56563 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lim2P56563 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.3■□□□□ 0.52
Lim2P56563 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Lim2P56563 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Lim2P56563 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lim2P56563 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Lim2P56563 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.29■□□□□ 0.52
Lim2P56563 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lim2P56563 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lim2P56563 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Lim2P56563 Gm26524-201ENSMUST00000192339 390 ntBASIC18.29■□□□□ 0.52
Lim2P56563 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Lim2P56563 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Lim2P56563 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Lim2P56563 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lim2P56563 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Lim2P56563 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lim2P56563 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lim2P56563 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lim2P56563 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.28■□□□□ 0.52
Lim2P56563 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Lim2P56563 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lim2P56563 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lim2P56563 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lim2P56563 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Lim2P56563 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.28■□□□□ 0.52
Lim2P56563 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lim2P56563 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Lim2P56563 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lim2P56563 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.27■□□□□ 0.52
Lim2P56563 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lim2P56563 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Lim2P56563 Gm12441-201ENSMUST00000121806 588 ntBASIC18.27■□□□□ 0.52
Lim2P56563 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms