Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Gm43017-201ENSMUST00000198296 752 ntBASIC17.57■□□□□ 0.4
Cdkn2bP55271 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.57■□□□□ 0.4
Cdkn2bP55271 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Tgds-204ENSMUST00000228543 1594 ntBASIC17.57■□□□□ 0.4
Cdkn2bP55271 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cdkn2bP55271 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.56■□□□□ 0.4
Cdkn2bP55271 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cdkn2bP55271 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.56■□□□□ 0.4
Cdkn2bP55271 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cdkn2bP55271 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Gm45417-201ENSMUST00000209533 758 ntBASIC17.55■□□□□ 0.4
Cdkn2bP55271 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.55■□□□□ 0.4
Cdkn2bP55271 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn2bP55271 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.54■□□□□ 0.4
Cdkn2bP55271 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cdkn2bP55271 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Cdkn2bP55271 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Gm13146-201ENSMUST00000118508 780 ntBASIC17.53■□□□□ 0.4
Cdkn2bP55271 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cdkn2bP55271 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Gm43060-201ENSMUST00000200621 289 ntBASIC17.52■□□□□ 0.4
Cdkn2bP55271 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cdkn2bP55271 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cdkn2bP55271 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms