Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lhx3P50481 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lhx3P50481 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx3P50481 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx3P50481 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Lhx3P50481 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.64■□□□□ 0.57
Lhx3P50481 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.64■□□□□ 0.57
Lhx3P50481 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.64■□□□□ 0.57
Lhx3P50481 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx3P50481 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Lhx3P50481 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx3P50481 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx3P50481 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx3P50481 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lhx3P50481 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx3P50481 Gm38308-201ENSMUST00000194934 1809 ntBASIC18.63■□□□□ 0.57
Lhx3P50481 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.63■□□□□ 0.57
Lhx3P50481 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx3P50481 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx3P50481 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx3P50481 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Lhx3P50481 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx3P50481 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lhx3P50481 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lhx3P50481 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.63■□□□□ 0.57
Lhx3P50481 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.63■□□□□ 0.57
Lhx3P50481 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.63■□□□□ 0.57
Lhx3P50481 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx3P50481 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx3P50481 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx3P50481 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx3P50481 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Lhx3P50481 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.62■□□□□ 0.57
Lhx3P50481 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx3P50481 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx3P50481 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.62■□□□□ 0.57
Lhx3P50481 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Lhx3P50481 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx3P50481 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Lhx3P50481 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx3P50481 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx3P50481 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx3P50481 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx3P50481 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.61■□□□□ 0.57
Lhx3P50481 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx3P50481 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx3P50481 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx3P50481 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Lhx3P50481 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx3P50481 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx3P50481 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx3P50481 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx3P50481 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx3P50481 Gm11249-201ENSMUST00000117071 859 ntBASIC18.6■□□□□ 0.57
Lhx3P50481 Trmt13-210ENSMUST00000198454 880 ntBASIC18.6■□□□□ 0.57
Lhx3P50481 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.6■□□□□ 0.57
Lhx3P50481 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Lhx3P50481 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx3P50481 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx3P50481 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Lhx3P50481 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx3P50481 Flg-201ENSMUST00000050758 1488 ntBASIC18.59■□□□□ 0.57
Lhx3P50481 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.59■□□□□ 0.57
Lhx3P50481 Gm11927-201ENSMUST00000118472 759 ntBASIC18.59■□□□□ 0.57
Lhx3P50481 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.59■□□□□ 0.57
Lhx3P50481 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Lhx3P50481 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx3P50481 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Lhx3P50481 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx3P50481 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx3P50481 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Lhx3P50481 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx3P50481 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx3P50481 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx3P50481 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx3P50481 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx3P50481 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Lhx3P50481 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx3P50481 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx3P50481 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx3P50481 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx3P50481 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
Lhx3P50481 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.58■□□□□ 0.56
Lhx3P50481 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Lhx3P50481 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Lhx3P50481 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Lhx3P50481 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx3P50481 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx3P50481 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx3P50481 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.57■□□□□ 0.56
Lhx3P50481 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Lhx3P50481 Gm20760-201ENSMUST00000179197 648 ntBASIC18.57■□□□□ 0.56
Lhx3P50481 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.57■□□□□ 0.56
Lhx3P50481 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.57■□□□□ 0.56
Lhx3P50481 AC112142.1-201ENSMUST00000228796 918 ntBASIC18.57■□□□□ 0.56
Lhx3P50481 Zfp783-201ENSMUST00000095946 670 ntBASIC18.57■□□□□ 0.56
Lhx3P50481 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms