Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Fen1P39749 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fen1P39749 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Fen1P39749 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Fen1P39749 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Fen1P39749 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.4■□□□□ 0.54
Fen1P39749 Gm27454-201ENSMUST00000185090 204 ntBASIC18.4■□□□□ 0.54
Fen1P39749 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Fen1P39749 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Fen1P39749 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.4■□□□□ 0.54
Fen1P39749 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fen1P39749 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Fen1P39749 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Fen1P39749 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fen1P39749 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Fen1P39749 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Fen1P39749 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.39■□□□□ 0.53
Fen1P39749 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Fen1P39749 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.39■□□□□ 0.53
Fen1P39749 Spcs1-204ENSMUST00000226782 949 ntBASIC18.39■□□□□ 0.53
Fen1P39749 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Fen1P39749 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Fen1P39749 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Fen1P39749 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.39■□□□□ 0.53
Fen1P39749 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fen1P39749 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Fen1P39749 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.38■□□□□ 0.53
Fen1P39749 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Fen1P39749 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.38■□□□□ 0.53
Fen1P39749 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.38■□□□□ 0.53
Fen1P39749 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.38■□□□□ 0.53
Fen1P39749 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Fen1P39749 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Fen1P39749 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Fen1P39749 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Fen1P39749 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.37■□□□□ 0.53
Fen1P39749 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 Gm45417-201ENSMUST00000209533 758 ntBASIC18.37■□□□□ 0.53
Fen1P39749 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Fen1P39749 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Fen1P39749 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.36■□□□□ 0.53
Fen1P39749 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Gm43137-201ENSMUST00000198052 594 ntBASIC18.36■□□□□ 0.53
Fen1P39749 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Fen1P39749 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Fen1P39749 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fen1P39749 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fen1P39749 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fen1P39749 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Fen1P39749 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fen1P39749 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Fen1P39749 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Fen1P39749 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Fen1P39749 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms