Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cd40lgP27548 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Gm12918-201ENSMUST00000120234 636 ntBASIC16.85■□□□□ 0.29
Cd40lgP27548 Gm15710-201ENSMUST00000121821 636 ntBASIC16.85■□□□□ 0.29
Cd40lgP27548 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cd40lgP27548 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Gm5075-201ENSMUST00000196916 622 ntBASIC16.85■□□□□ 0.29
Cd40lgP27548 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.85■□□□□ 0.29
Cd40lgP27548 Gm6365-201ENSMUST00000054711 744 ntBASIC16.85■□□□□ 0.29
Cd40lgP27548 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Cd40lgP27548 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.85■□□□□ 0.29
Cd40lgP27548 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.85■□□□□ 0.29
Cd40lgP27548 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cd40lgP27548 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.85■□□□□ 0.29
Cd40lgP27548 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cd40lgP27548 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Cd40lgP27548 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.84■□□□□ 0.29
Cd40lgP27548 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Cd40lgP27548 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.84■□□□□ 0.29
Cd40lgP27548 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cd40lgP27548 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cd40lgP27548 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.84■□□□□ 0.29
Cd40lgP27548 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cd40lgP27548 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Cd40lgP27548 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cd40lgP27548 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Cd40lgP27548 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cd40lgP27548 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC16.83■□□□□ 0.28
Cd40lgP27548 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.83■□□□□ 0.28
Cd40lgP27548 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cd40lgP27548 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Cd40lgP27548 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Gm29257-201ENSMUST00000186115 639 ntBASIC16.82■□□□□ 0.28
Cd40lgP27548 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.82■□□□□ 0.28
Cd40lgP27548 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cd40lgP27548 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.82■□□□□ 0.28
Cd40lgP27548 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Cd40lgP27548 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cd40lgP27548 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cd40lgP27548 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cd40lgP27548 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40lgP27548 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40lgP27548 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40lgP27548 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.81■□□□□ 0.28
Cd40lgP27548 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40lgP27548 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cd40lgP27548 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cd40lgP27548 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40lgP27548 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cd40lgP27548 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40lgP27548 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40lgP27548 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cd40lgP27548 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40lgP27548 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40lgP27548 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40lgP27548 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cd40lgP27548 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40lgP27548 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.8■□□□□ 0.28
Cd40lgP27548 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.8■□□□□ 0.28
Cd40lgP27548 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40lgP27548 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40lgP27548 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40lgP27548 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cd40lgP27548 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cd40lgP27548 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40lgP27548 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.79■□□□□ 0.28
Cd40lgP27548 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cd40lgP27548 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40lgP27548 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cd40lgP27548 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40lgP27548 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40lgP27548 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cd40lgP27548 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cd40lgP27548 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms