Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cntn1P12960 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cntn1P12960 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Cntn1P12960 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntn1P12960 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.55■□□□□ 0.4
Cntn1P12960 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntn1P12960 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Cntn1P12960 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntn1P12960 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.55■□□□□ 0.4
Cntn1P12960 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.55■□□□□ 0.4
Cntn1P12960 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cntn1P12960 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntn1P12960 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cntn1P12960 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cntn1P12960 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Cntn1P12960 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cntn1P12960 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cntn1P12960 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cntn1P12960 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cntn1P12960 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cntn1P12960 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.54■□□□□ 0.4
Cntn1P12960 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.54■□□□□ 0.4
Cntn1P12960 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cntn1P12960 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Cntn1P12960 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cntn1P12960 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Dio3-201ENSMUST00000097228 1449 ntBASIC17.54■□□□□ 0.4
Cntn1P12960 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cntn1P12960 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.53■□□□□ 0.4
Cntn1P12960 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.53■□□□□ 0.4
Cntn1P12960 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cntn1P12960 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.53■□□□□ 0.4
Cntn1P12960 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.53■□□□□ 0.4
Cntn1P12960 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cntn1P12960 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntn1P12960 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Cntn1P12960 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntn1P12960 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cntn1P12960 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cntn1P12960 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cntn1P12960 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntn1P12960 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntn1P12960 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntn1P12960 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.52■□□□□ 0.4
Cntn1P12960 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntn1P12960 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cntn1P12960 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Cntn1P12960 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cntn1P12960 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cntn1P12960 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cntn1P12960 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cntn1P12960 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Cntn1P12960 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cntn1P12960 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntn1P12960 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntn1P12960 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntn1P12960 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cntn1P12960 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.51■□□□□ 0.39
Cntn1P12960 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.51■□□□□ 0.39
Cntn1P12960 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.51■□□□□ 0.39
Cntn1P12960 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.51■□□□□ 0.39
Cntn1P12960 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntn1P12960 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntn1P12960 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cntn1P12960 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cntn1P12960 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.5■□□□□ 0.39
Cntn1P12960 Gm2399-201ENSMUST00000104944 225 ntBASIC17.5■□□□□ 0.39
Cntn1P12960 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.5■□□□□ 0.39
Cntn1P12960 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cntn1P12960 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cntn1P12960 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cntn1P12960 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cntn1P12960 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cntn1P12960 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms