Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.25■□□□□ 0.19
Ccl3P10855 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ccl3P10855 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.25■□□□□ 0.19
Ccl3P10855 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ccl3P10855 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.24■□□□□ 0.19
Ccl3P10855 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ccl3P10855 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccl3P10855 Gm12382-201ENSMUST00000122005 922 ntBASIC16.24■□□□□ 0.19
Ccl3P10855 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.24■□□□□ 0.19
Ccl3P10855 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.24■□□□□ 0.19
Ccl3P10855 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccl3P10855 Odf3b-204ENSMUST00000227834 930 ntBASIC16.24■□□□□ 0.19
Ccl3P10855 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ccl3P10855 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.24■□□□□ 0.19
Ccl3P10855 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.24■□□□□ 0.19
Ccl3P10855 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ccl3P10855 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccl3P10855 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Ccl3P10855 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.23■□□□□ 0.19
Ccl3P10855 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.23■□□□□ 0.19
Ccl3P10855 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Timm23-208ENSMUST00000226683 750 ntBASIC16.23■□□□□ 0.19
Ccl3P10855 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.23■□□□□ 0.19
Ccl3P10855 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ccl3P10855 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Ccl3P10855 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ccl3P10855 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.22■□□□□ 0.19
Ccl3P10855 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ccl3P10855 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.22■□□□□ 0.19
Ccl3P10855 Gm11539-201ENSMUST00000119837 557 ntBASIC16.22■□□□□ 0.19
Ccl3P10855 Gm13436-201ENSMUST00000120418 567 ntBASIC16.22■□□□□ 0.19
Ccl3P10855 Gm13559-201ENSMUST00000120476 863 ntBASIC16.22■□□□□ 0.19
Ccl3P10855 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ccl3P10855 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ccl3P10855 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ccl3P10855 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl3P10855 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl3P10855 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ccl3P10855 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl3P10855 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.21■□□□□ 0.19
Ccl3P10855 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl3P10855 Mir6349-201ENSMUST00000184059 97 ntBASIC16.21■□□□□ 0.19
Ccl3P10855 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl3P10855 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.21■□□□□ 0.19
Ccl3P10855 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl3P10855 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ccl3P10855 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.21■□□□□ 0.19
Ccl3P10855 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl3P10855 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl3P10855 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl3P10855 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ccl3P10855 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.21■□□□□ 0.18
Ccl3P10855 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl3P10855 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl3P10855 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl3P10855 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl3P10855 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ccl3P10855 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccl3P10855 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.2■□□□□ 0.18
Ccl3P10855 Gm3375-201ENSMUST00000203929 796 ntBASIC16.2■□□□□ 0.18
Ccl3P10855 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms